prostate tissue umap plots Search Results


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ATCC prostate carcinoma du 145 rpmi1640 rostate cancer lncap rpmi1640 rostate adenocarcinoma pc 3 rpmi1640 uman
Prostate Carcinoma Du 145 Rpmi1640 Rostate Cancer Lncap Rpmi1640 Rostate Adenocarcinoma Pc 3 Rpmi1640 Uman, supplied by ATCC, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Uman Diagnostics human prostate biopsy specimens
TSP-1 expression increases following androgen ablation in the mouse <t>prostate</t> and in patient-matched <t>biopsy</t> <t>specimens</t> in vivo. Prostate tissue sections were immunostained with anti-TSP antibody. (a) Prostate <t>tissues</t> were collected from intact or castrated (1-21 days post-castration; n=5 per group) wildtype (C57Bl/6) mice. Sections from intact and 3 days post-castration are shown. (b) TSP-1 staining intensity was graded on a 1-4 scale in the epithelium and stroma of the dorsal prostate. (c) The vessels were counted in the dorsal prostate stroma and the MVD:TSP-1 staining ratio calculated. (d) Patient-matched biopsies were taken from PCa patients before and 3-7 days after androgen ablation therapy. Six of eight patient tissues showed increased immunoreactivity following androgen ablation therapy. Pre- and post-therapy tissues are shown for two patients. (e) TSP-1 staining was graded on a 1-4 scale in the epithelial and stromal compartments. *Significantly increased in castrated compared to intact, P<0.012, and **significantly increased in <t>human</t> post-ADT tissues, P<00.013.
Human Prostate Biopsy Specimens, supplied by Uman Diagnostics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Human Protein Atlas prostate tissue umap plots
<t>RNA-Seq</t> Analysis showing gene expression and clustering of the immortalized cell lines and PrECs. ( a ) Principal Component Analysis (PCA) of the RNA-Seq data for all the clones and PrEC. ( b ) Prostate tissue <t>UMAP</t> plots obtained using scRNA-Seq by the Human Protein Atlas (with superimposed expression of Actin (ACTG1)) identify all distinct populations in the primary human prostate . ( c ) Gene expression heat map of predicted correlation scores (Preds) of each clone and hPrECs to the cell populations identified in the human prostate using scRNA-Seq. Prediction scores range from 0.0 to 1.0 (blue to dark red scale on the left). The distinct cell populations identified by the Human Atlas using single cell-RNA-Seq are labeled by color and a number (top of the heatmap and legend on the right). Clones and PrEC RNA-Seq samples were analyzed in triplicate. The prediction score in B indicate that the clones are most closely related to the basal prostatic population designated c2 (labeled red/orange in the first column of the heat map).
Prostate Tissue Umap Plots, supplied by Human Protein Atlas, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Lonza human prostate epithelial cells
<t>RNA-Seq</t> Analysis showing gene expression and clustering of the immortalized cell lines and PrECs. ( a ) Principal Component Analysis (PCA) of the RNA-Seq data for all the clones and PrEC. ( b ) Prostate tissue <t>UMAP</t> plots obtained using scRNA-Seq by the Human Protein Atlas (with superimposed expression of Actin (ACTG1)) identify all distinct populations in the primary human prostate . ( c ) Gene expression heat map of predicted correlation scores (Preds) of each clone and hPrECs to the cell populations identified in the human prostate using scRNA-Seq. Prediction scores range from 0.0 to 1.0 (blue to dark red scale on the left). The distinct cell populations identified by the Human Atlas using single cell-RNA-Seq are labeled by color and a number (top of the heatmap and legend on the right). Clones and PrEC RNA-Seq samples were analyzed in triplicate. The prediction score in B indicate that the clones are most closely related to the basal prostatic population designated c2 (labeled red/orange in the first column of the heat map).
Human Prostate Epithelial Cells, supplied by Lonza, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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PeproTech fgf-2 growth factor
<t>RNA-Seq</t> Analysis showing gene expression and clustering of the immortalized cell lines and PrECs. ( a ) Principal Component Analysis (PCA) of the RNA-Seq data for all the clones and PrEC. ( b ) Prostate tissue <t>UMAP</t> plots obtained using scRNA-Seq by the Human Protein Atlas (with superimposed expression of Actin (ACTG1)) identify all distinct populations in the primary human prostate . ( c ) Gene expression heat map of predicted correlation scores (Preds) of each clone and hPrECs to the cell populations identified in the human prostate using scRNA-Seq. Prediction scores range from 0.0 to 1.0 (blue to dark red scale on the left). The distinct cell populations identified by the Human Atlas using single cell-RNA-Seq are labeled by color and a number (top of the heatmap and legend on the right). Clones and PrEC RNA-Seq samples were analyzed in triplicate. The prediction score in B indicate that the clones are most closely related to the basal prostatic population designated c2 (labeled red/orange in the first column of the heat map).
Fgf 2 Growth Factor, supplied by PeproTech, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Uman Diagnostics chromosome 1
<t>RNA-Seq</t> Analysis showing gene expression and clustering of the immortalized cell lines and PrECs. ( a ) Principal Component Analysis (PCA) of the RNA-Seq data for all the clones and PrEC. ( b ) Prostate tissue <t>UMAP</t> plots obtained using scRNA-Seq by the Human Protein Atlas (with superimposed expression of Actin (ACTG1)) identify all distinct populations in the primary human prostate . ( c ) Gene expression heat map of predicted correlation scores (Preds) of each clone and hPrECs to the cell populations identified in the human prostate using scRNA-Seq. Prediction scores range from 0.0 to 1.0 (blue to dark red scale on the left). The distinct cell populations identified by the Human Atlas using single cell-RNA-Seq are labeled by color and a number (top of the heatmap and legend on the right). Clones and PrEC RNA-Seq samples were analyzed in triplicate. The prediction score in B indicate that the clones are most closely related to the basal prostatic population designated c2 (labeled red/orange in the first column of the heat map).
Chromosome 1, supplied by Uman Diagnostics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Thermo Fisher basic fibroblast growth factor (bfgf; human, recombinant
<t>RNA-Seq</t> Analysis showing gene expression and clustering of the immortalized cell lines and PrECs. ( a ) Principal Component Analysis (PCA) of the RNA-Seq data for all the clones and PrEC. ( b ) Prostate tissue <t>UMAP</t> plots obtained using scRNA-Seq by the Human Protein Atlas (with superimposed expression of Actin (ACTG1)) identify all distinct populations in the primary human prostate . ( c ) Gene expression heat map of predicted correlation scores (Preds) of each clone and hPrECs to the cell populations identified in the human prostate using scRNA-Seq. Prediction scores range from 0.0 to 1.0 (blue to dark red scale on the left). The distinct cell populations identified by the Human Atlas using single cell-RNA-Seq are labeled by color and a number (top of the heatmap and legend on the right). Clones and PrEC RNA-Seq samples were analyzed in triplicate. The prediction score in B indicate that the clones are most closely related to the basal prostatic population designated c2 (labeled red/orange in the first column of the heat map).
Basic Fibroblast Growth Factor (Bfgf; Human, Recombinant, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Uman Diagnostics gene for prostate cancer
<t>RNA-Seq</t> Analysis showing gene expression and clustering of the immortalized cell lines and PrECs. ( a ) Principal Component Analysis (PCA) of the RNA-Seq data for all the clones and PrEC. ( b ) Prostate tissue <t>UMAP</t> plots obtained using scRNA-Seq by the Human Protein Atlas (with superimposed expression of Actin (ACTG1)) identify all distinct populations in the primary human prostate . ( c ) Gene expression heat map of predicted correlation scores (Preds) of each clone and hPrECs to the cell populations identified in the human prostate using scRNA-Seq. Prediction scores range from 0.0 to 1.0 (blue to dark red scale on the left). The distinct cell populations identified by the Human Atlas using single cell-RNA-Seq are labeled by color and a number (top of the heatmap and legend on the right). Clones and PrEC RNA-Seq samples were analyzed in triplicate. The prediction score in B indicate that the clones are most closely related to the basal prostatic population designated c2 (labeled red/orange in the first column of the heat map).
Gene For Prostate Cancer, supplied by Uman Diagnostics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Boehringer Mannheim human recombinant basic fibroblast growth factor (fgf-2)
<t>RNA-Seq</t> Analysis showing gene expression and clustering of the immortalized cell lines and PrECs. ( a ) Principal Component Analysis (PCA) of the RNA-Seq data for all the clones and PrEC. ( b ) Prostate tissue <t>UMAP</t> plots obtained using scRNA-Seq by the Human Protein Atlas (with superimposed expression of Actin (ACTG1)) identify all distinct populations in the primary human prostate . ( c ) Gene expression heat map of predicted correlation scores (Preds) of each clone and hPrECs to the cell populations identified in the human prostate using scRNA-Seq. Prediction scores range from 0.0 to 1.0 (blue to dark red scale on the left). The distinct cell populations identified by the Human Atlas using single cell-RNA-Seq are labeled by color and a number (top of the heatmap and legend on the right). Clones and PrEC RNA-Seq samples were analyzed in triplicate. The prediction score in B indicate that the clones are most closely related to the basal prostatic population designated c2 (labeled red/orange in the first column of the heat map).
Human Recombinant Basic Fibroblast Growth Factor (Fgf 2), supplied by Boehringer Mannheim, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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ATCC pdt uman prostate cancer pc 3 cell line
<t>RNA-Seq</t> Analysis showing gene expression and clustering of the immortalized cell lines and PrECs. ( a ) Principal Component Analysis (PCA) of the RNA-Seq data for all the clones and PrEC. ( b ) Prostate tissue <t>UMAP</t> plots obtained using scRNA-Seq by the Human Protein Atlas (with superimposed expression of Actin (ACTG1)) identify all distinct populations in the primary human prostate . ( c ) Gene expression heat map of predicted correlation scores (Preds) of each clone and hPrECs to the cell populations identified in the human prostate using scRNA-Seq. Prediction scores range from 0.0 to 1.0 (blue to dark red scale on the left). The distinct cell populations identified by the Human Atlas using single cell-RNA-Seq are labeled by color and a number (top of the heatmap and legend on the right). Clones and PrEC RNA-Seq samples were analyzed in triplicate. The prediction score in B indicate that the clones are most closely related to the basal prostatic population designated c2 (labeled red/orange in the first column of the heat map).
Pdt Uman Prostate Cancer Pc 3 Cell Line, supplied by ATCC, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Fresh tissue lysate prepared from human prostate tomor
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Image Search Results


TSP-1 expression increases following androgen ablation in the mouse prostate and in patient-matched biopsy specimens in vivo. Prostate tissue sections were immunostained with anti-TSP antibody. (a) Prostate tissues were collected from intact or castrated (1-21 days post-castration; n=5 per group) wildtype (C57Bl/6) mice. Sections from intact and 3 days post-castration are shown. (b) TSP-1 staining intensity was graded on a 1-4 scale in the epithelium and stroma of the dorsal prostate. (c) The vessels were counted in the dorsal prostate stroma and the MVD:TSP-1 staining ratio calculated. (d) Patient-matched biopsies were taken from PCa patients before and 3-7 days after androgen ablation therapy. Six of eight patient tissues showed increased immunoreactivity following androgen ablation therapy. Pre- and post-therapy tissues are shown for two patients. (e) TSP-1 staining was graded on a 1-4 scale in the epithelial and stromal compartments. *Significantly increased in castrated compared to intact, P<0.012, and **significantly increased in human post-ADT tissues, P<00.013.

Journal:

Article Title: Thrombospondin-1 Regulates the Normal Prostate In Vivo Through Angiogenesis and TGF-? Activation

doi: 10.1038/labinvest.2010.90

Figure Lengend Snippet: TSP-1 expression increases following androgen ablation in the mouse prostate and in patient-matched biopsy specimens in vivo. Prostate tissue sections were immunostained with anti-TSP antibody. (a) Prostate tissues were collected from intact or castrated (1-21 days post-castration; n=5 per group) wildtype (C57Bl/6) mice. Sections from intact and 3 days post-castration are shown. (b) TSP-1 staining intensity was graded on a 1-4 scale in the epithelium and stroma of the dorsal prostate. (c) The vessels were counted in the dorsal prostate stroma and the MVD:TSP-1 staining ratio calculated. (d) Patient-matched biopsies were taken from PCa patients before and 3-7 days after androgen ablation therapy. Six of eight patient tissues showed increased immunoreactivity following androgen ablation therapy. Pre- and post-therapy tissues are shown for two patients. (e) TSP-1 staining was graded on a 1-4 scale in the epithelial and stromal compartments. *Significantly increased in castrated compared to intact, P<0.012, and **significantly increased in human post-ADT tissues, P<00.013.

Article Snippet: Human Prostate Tissues Human prostate biopsy specimens were taken before and 3-7 days after surgical castration from PCa patients (n=8) at Umea University (Umea, Sweden).

Techniques: Expressing, In Vivo, Staining

RNA-Seq Analysis showing gene expression and clustering of the immortalized cell lines and PrECs. ( a ) Principal Component Analysis (PCA) of the RNA-Seq data for all the clones and PrEC. ( b ) Prostate tissue UMAP plots obtained using scRNA-Seq by the Human Protein Atlas (with superimposed expression of Actin (ACTG1)) identify all distinct populations in the primary human prostate . ( c ) Gene expression heat map of predicted correlation scores (Preds) of each clone and hPrECs to the cell populations identified in the human prostate using scRNA-Seq. Prediction scores range from 0.0 to 1.0 (blue to dark red scale on the left). The distinct cell populations identified by the Human Atlas using single cell-RNA-Seq are labeled by color and a number (top of the heatmap and legend on the right). Clones and PrEC RNA-Seq samples were analyzed in triplicate. The prediction score in B indicate that the clones are most closely related to the basal prostatic population designated c2 (labeled red/orange in the first column of the heat map).

Journal: Scientific Reports

Article Title: Derivation of human primary prostate epithelial cell lines by differentially targeting the CDKN2A locus along with expression of hTERT

doi: 10.1038/s41598-024-71306-5

Figure Lengend Snippet: RNA-Seq Analysis showing gene expression and clustering of the immortalized cell lines and PrECs. ( a ) Principal Component Analysis (PCA) of the RNA-Seq data for all the clones and PrEC. ( b ) Prostate tissue UMAP plots obtained using scRNA-Seq by the Human Protein Atlas (with superimposed expression of Actin (ACTG1)) identify all distinct populations in the primary human prostate . ( c ) Gene expression heat map of predicted correlation scores (Preds) of each clone and hPrECs to the cell populations identified in the human prostate using scRNA-Seq. Prediction scores range from 0.0 to 1.0 (blue to dark red scale on the left). The distinct cell populations identified by the Human Atlas using single cell-RNA-Seq are labeled by color and a number (top of the heatmap and legend on the right). Clones and PrEC RNA-Seq samples were analyzed in triplicate. The prediction score in B indicate that the clones are most closely related to the basal prostatic population designated c2 (labeled red/orange in the first column of the heat map).

Article Snippet: Fig. 6 RNA-Seq Analysis showing gene expression and clustering of the immortalized cell lines and PrECs. ( a ) Principal Component Analysis (PCA) of the RNA-Seq data for all the clones and PrEC. ( b ) Prostate tissue UMAP plots obtained using scRNA-Seq by the Human Protein Atlas (with superimposed expression of Actin (ACTG1)) identify all distinct populations in the primary human prostate . ( c ) Gene expression heat map of predicted correlation scores (Preds) of each clone and hPrECs to the cell populations identified in the human prostate using scRNA-Seq.

Techniques: RNA Sequencing, Gene Expression, Clone Assay, Expressing, Labeling